Index

A

Accessor (class in neuroglancer_scripts.accessor) add_argparse_options() (in module neuroglancer_scripts.accessor) (in module neuroglancer_scripts.chunk_encoding) (in module neuroglancer_scripts.downscaling)

affine_transform_mesh() (in module neuroglancer_scripts.mesh) AveragingDownscaler (class in neuroglancer_scripts.downscaling)

C

can_read (neuroglancer_scripts.accessor.Accessor attribute) (neuroglancer_scripts.file_accessor.FileAccessor attribute) (neuroglancer_scripts.http_accessor.HttpAccessor attribute) can_write (neuroglancer_scripts.accessor.Accessor attribute) (neuroglancer_scripts.file_accessor.FileAccessor attribute) (neuroglancer_scripts.http_accessor.HttpAccessor attribute)

ceil_div() (in module neuroglancer_scripts.utils) check_factors() (neuroglancer_scripts.downscaling.AveragingDownscaler method) (neuroglancer_scripts.downscaling.Downscaler method) chunk_relative_url() (neuroglancer_scripts.http_accessor.HttpAccessor method) ChunkEncoder (class in neuroglancer_scripts.chunk_encoding) CompressedSegmentationEncoder (class in neuroglancer_scripts.chunk_encoding) convert_file_url_to_pathname() (in module neuroglancer_scripts.accessor)

D

DataAccessError decode() (neuroglancer_scripts.chunk_encoding.ChunkEncoder method) (neuroglancer_scripts.chunk_encoding.CompressedSegmentationEncoder method) (neuroglancer_scripts.chunk_encoding.JpegChunkEncoder method) (neuroglancer_scripts.chunk_encoding.RawChunkEncoder method)

downscale() (neuroglancer_scripts.downscaling.AveragingDownscaler method) (neuroglancer_scripts.downscaling.Downscaler method) (neuroglancer_scripts.downscaling.MajorityDownscaler method) (neuroglancer_scripts.downscaling.StridingDownscaler method) Downscaler (class in neuroglancer_scripts.downscaling)

E

encode() (neuroglancer_scripts.chunk_encoding.ChunkEncoder method) (neuroglancer_scripts.chunk_encoding.CompressedSegmentationEncoder method) (neuroglancer_scripts.chunk_encoding.JpegChunkEncoder method) (neuroglancer_scripts.chunk_encoding.RawChunkEncoder method)

F

fetch_chunk() (neuroglancer_scripts.accessor.Accessor method) (neuroglancer_scripts.file_accessor.FileAccessor method) (neuroglancer_scripts.http_accessor.HttpAccessor method) fetch_file() (neuroglancer_scripts.accessor.Accessor method) (neuroglancer_scripts.file_accessor.FileAccessor method) (neuroglancer_scripts.http_accessor.HttpAccessor method)

file_exists() (neuroglancer_scripts.accessor.Accessor method) (neuroglancer_scripts.file_accessor.FileAccessor method) (neuroglancer_scripts.http_accessor.HttpAccessor method) FileAccessor (class in neuroglancer_scripts.file_accessor) format_length() (in module neuroglancer_scripts.utils)

G

get_accessor_for_url() (in module neuroglancer_scripts.accessor) get_downscaler() (in module neuroglancer_scripts.downscaling)

get_encoder() (in module neuroglancer_scripts.chunk_encoding) get_IO_for_existing_dataset() (in module neuroglancer_scripts.precomputed_io) get_IO_for_new_dataset() (in module neuroglancer_scripts.precomputed_io)

H

HttpAccessor (class in neuroglancer_scripts.http_accessor)

I

IncompatibleEncoderError info (neuroglancer_scripts.precomputed_io.PrecomputedIO property) InvalidFormatError

InvalidInfoError InvalidMeshDataError invert_permutation() (in module neuroglancer_scripts.utils)

J

JpegChunkEncoder (class in neuroglancer_scripts.chunk_encoding)

L

LENGTH_UNITS (in module neuroglancer_scripts.utils) lossy (neuroglancer_scripts.chunk_encoding.ChunkEncoder attribute) (neuroglancer_scripts.chunk_encoding.CompressedSegmentationEncoder attribute) (neuroglancer_scripts.chunk_encoding.JpegChunkEncoder attribute) (neuroglancer_scripts.chunk_encoding.RawChunkEncoder attribute)

M

MajorityDownscaler (class in neuroglancer_scripts.downscaling) mime_type (neuroglancer_scripts.chunk_encoding.ChunkEncoder attribute) (neuroglancer_scripts.chunk_encoding.JpegChunkEncoder attribute) module neuroglancer_scripts neuroglancer_scripts.accessor neuroglancer_scripts.chunk_encoding neuroglancer_scripts.downscaling neuroglancer_scripts.file_accessor neuroglancer_scripts.http_accessor neuroglancer_scripts.mesh neuroglancer_scripts.precomputed_io neuroglancer_scripts.utils

N

neuroglancer_scripts module neuroglancer_scripts.accessor module neuroglancer_scripts.chunk_encoding module neuroglancer_scripts.downscaling module neuroglancer_scripts.file_accessor module

neuroglancer_scripts.http_accessor module neuroglancer_scripts.mesh module neuroglancer_scripts.precomputed_io module neuroglancer_scripts.utils module

P

permute() (in module neuroglancer_scripts.utils)

PrecomputedIO (class in neuroglancer_scripts.precomputed_io)

R

RawChunkEncoder (class in neuroglancer_scripts.chunk_encoding) read_chunk() (neuroglancer_scripts.precomputed_io.PrecomputedIO method)

read_precomputed_mesh() (in module neuroglancer_scripts.mesh) readable_count() (in module neuroglancer_scripts.utils)

S

save_mesh_as_neuroglancer_vtk() (in module neuroglancer_scripts.mesh) save_mesh_as_precomputed() (in module neuroglancer_scripts.mesh) scale_info() (neuroglancer_scripts.precomputed_io.PrecomputedIO method) scale_is_lossy() (neuroglancer_scripts.precomputed_io.PrecomputedIO method)

store_chunk() (neuroglancer_scripts.accessor.Accessor method) (neuroglancer_scripts.file_accessor.FileAccessor method) store_file() (neuroglancer_scripts.accessor.Accessor method) (neuroglancer_scripts.file_accessor.FileAccessor method) StridingDownscaler (class in neuroglancer_scripts.downscaling)

U

URLError

V

validate_chunk_coords() (neuroglancer_scripts.precomputed_io.PrecomputedIO method)

W

write_chunk() (neuroglancer_scripts.precomputed_io.PrecomputedIO method)